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Inverting the model of genomics data sharing with the NHGRI Genomic Data Science Analysis, Visualization, and Informatics Lab-space

Michael C Schatz, Anthony A Philippakis, Enis Afgan, Eric Banks, Vincent J Carey, Robert J Carroll, Alessandro Culotti, Kyle Ellrott, Jeremy Goecks, Robert L Grossman, others

recountmethylation enables flexible analysis of public blood DNA methylation array data

Sean K Maden, Brian Walsh, Kyle Ellrott, Kasper D Hansen, Reid Thompson, Abhinav Nellore

A community challenge to evaluate RNA-seq, fusion detection, and isoform quantification methods for cancer discovery

Allison Creason, David Haan, Kristen Dang, Kami E Chiotti, Matthew Inkman, Andrew Lamb, Thomas Yu, Yin Hu, Thea C Norman, Alex Buchanan, others

GA4GH: International policies and standards for data sharing across genomic research and healthcare

Heidi L Rehm, Angela JH Page, Lindsay Smith, Jeremy B Adams, Gil Alterovitz, Lawrence J Babb, Maxmillian P Barkley, Michael Baudis, Michael JS Beauvais, Tim Beck, others

A community effort to create standards for evaluating tumor subclonal reconstruction

Adriana Salcedo, Maxime Tarabichi, Shadrielle Melijah G Espiritu, Amit G Deshwar, Matei David, Nathan M Wilson, Stefan Dentro, Jeff A Wintersinger, Lydia Y Liu, Minjeong Ko, others

A harmonized meta-knowledgebase of clinical interpretations of somatic genomic variants in cancer

Alex H Wagner, Brian Walsh, Georgia Mayfield, David Tamborero, Dmitriy Sonkin, Kilannin Krysiak, Jordi Deu-Pons, Ryan P Duren, Jianjiong Gao, Julie McMurry, others

Butler enables rapid cloud-based analysis of thousands of human genomes

Sergei Yakneen, Sebastian M Waszak, Michael Gertz, Jan O Korbel

Exploring integrative analysis using the BioMedical evidence graph

Adam Struck, Brian Walsh, Alexander Buchanan, Jordan A Lee, Ryan Spangler, Joshua M Stuart, Kyle Ellrott

Neoepiscope improves neoepitope prediction with multivariant phasing

Mary A Wood, Austin Nguyen, Adam J Struck, Kyle Ellrott, Abhinav Nellore, Reid F Thompson

Pan-cancer analysis of whole genomes.

Satoshi Hirano, Lixing Yang, Malene Juul, Colin A Purdie, Brian Patrick O'Neill, Rolf Kabbe, Elli Papaemmanuil, Yu Fan, D Neil Hayes, Benjamin Raeder, others