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• Inverting the model of genomics data sharing with the NHGRI Genomic Data Science Analysis, Visualization, and Informatics Lab-space
• A community challenge to evaluate RNA-seq, fusion detection, and isoform quantification methods for cancer discovery
• GA4GH: International policies and standards for data sharing across genomic research and healthcare
• A community effort to create standards for evaluating tumor subclonal reconstruction
• A harmonized meta-knowledgebase of clinical interpretations of somatic genomic variants in cancer
• Pan-cancer analysis of whole genomes.
• Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples
• Sex differences in oncogenic mutational processes
• Creating standards for evaluating tumour subclonal reconstruction
• Reproducible biomedical benchmarking in the cloud: lessons from crowd-sourced data challenges
• A pan-cancer analysis reveals high-frequency genetic alterations in mediators of signaling by the TGF-$β$ superfamily
• Combining accurate tumor genome simulation with crowdsourcing to benchmark somatic structural variant detection
• Germline contamination and leakage in whole genome somatic single nucleotide variant detection
• Multi-center mutation calling in multiple cancers: the MC3 project
• Scalable open science approach for mutation calling of tumor exomes using multiple genomic pipelines
• SMMART: Serial measurements of molecular and architectural responses to therapy
• TBIO-27. GABRIELLA MILLER KIDS FIRST DATA RESOURCE CENTER ADVANCING GENETIC RESEARCH IN CHILDHOOD CANCER AND STRUCTURAL BIRTH DEFECTS THROUGH LARGE SCALE INTEGRATED DATA-DRIVEN DISCOVERY AND CLOUD-BASED PLATFORMS FOR COLLABORATIVE ANALYSIS
• Valection: design optimization for validation and verification studies
• A community challenge for inferring genetic predictors of gene essentialities through analysis of a functional screen of cancer cell lines
• Large-scale uniform analysis of cancer whole genomes in multiple computing environments
• TumorMap: exploring the molecular similarities of cancer samples in an interactive portal
• Abstract PR02: Multiple Pathway Learning accurately predicts gene essentiality in the Cancer Cell Line Encyclopedia
• Combining accurate tumour genome simulation with crowd-sourcing to benchmark somatic variant detection
• Combining tumor genome simulation with crowdsourcing to benchmark somatic single-nucleotide-variant detection
• Global optimization of somatic variant identification in cancer genomes with a global community challenge
• Comprehensive molecular characterization of clear cell renal cell carcinoma
• Structure of the gamma D-glutamyl-L-diamino acid endopeptidase YkfC from Bacillus cereus in complex with L-Ala--D-Glu: Insights into substrate recognition by NlpC/P60 cysteine peptidases
• The somatic genomic landscape of glioblastoma
• The UCSC cancer genomics browser: update 2013
• Weinstein JN
• Comprehensive genomic characterization of squamous cell lung cancers
• Comprehensive molecular characterization of human colon and rectal cancer
• Comprehensive molecular portraits of human breast tumours
• Predicting the impact of mutations in cancer using an integrated pathway approach
• A conserved fold for fimbrial components revealed by the crystal structure of a putative fimbrial assembly protein (BT1062) from Bacteroides thetaiotaomicron at 2.2 Å resolution
• Bacterial pleckstrin homology domains: a prokaryotic origin for the PH domain
• Structure of a membrane-attack complex/perforin (MACPF) family protein from the human gut symbiont Bacteroides thetaiotaomicron
• Structure of Bacteroides thetaiotaomicron BT2081 at 2.05 Å resolution: the first structural representative of a new protein family that may play a role in carbohydrate metabolism
• Structure of BT_3984, a member of the SusD/RagB family of nutrient-binding molecules
• Structure of the $γ$-D-glutamyl-L-diamino acid endopeptidase YkfC from Bacillus cereus in complex with L-Ala-$γ$-D-Glu: insights into substrate recognition by NlpC/P60 cysteine peptidases
• Structure of the c-D-glutamyl-L-diamino acid endopeptidase YkfC from Bacillus cereus in complex with L-Ala-c-D-Glu: insights into substrate recognition by NlpC/P60 cysteine peptidases
• Structures of the first representatives of Pfam family PF06684 (DUF1185) reveal a novel variant of the Bacillus chorismate mutase fold and suggest a role in amino-acid metabolism
• Structures of three members of Pfam PF02663 (FmdE) implicated in microbial methanogenesis reveal a conserved $α$+ $β$ core domain and an auxiliary C-terminal treble-clef zinc finger
• The crystal structure of a bacterial Sufu-like protein defines a novel group of bacterial proteins that are similar to the N-terminal domain of human Sufu
• The structure of BVU2987 from Bacteroides vulgatus reveals a superfamily of bacterial periplasmic proteins with possible inhibitory function
• The structure of KPN03535 (gi| 152972051), a novel putative lipoprotein from Klebsiella pneumoniae, reveals an OB-fold
• The structure of the first representative of Pfam family PF09836 reveals a two-domain organization and suggests involvement in transcriptional regulation
• Structural and functional characterizations of SsgB, a conserved activator of developmental cell division in morphologically complex actinomycetes